PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027734-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bHLH
Protein Properties Length: 69aa    MW: 7801.69 Da    PI: 10.4564
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027734-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.2e-082754531
                        HHHHHHHHHHHHHHHHHHHHCTSCC.C. CS
                 HLH  5 hnerErrRRdriNsafeeLrellPk.as 31
                          ++E++RR++++  +++L +llP+ +s
  WALNUT_00027734-RA 27 RRIIEKNRRNQMKVLYSRLNSLLPNpDS 54
                        679**********************443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.33E-62057IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-52558IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-52754IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MRVSVVNLAE EQMDHQRSQS SSTKVERRII EKNRRNQMKV LYSRLNSLLP NPDSKSDGQS  60
DSGRDIGGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007198864.11e-14hypothetical protein PRUPE_ppa018357mg
RefseqXP_008228998.11e-14PREDICTED: transcription factor bHLH36-like
TrEMBLM5VT391e-14M5VT39_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2677833